Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015912197.1_cds_XP_016462224.1_55472
CDS Infomation

[gene=LOC107785431] [db_xref=GeneID:107785431] [protein=protein WVD2-like 5 isoform X2] [protein_id=XP_016462224.1] [location=join(27173..27427,27509..27781,27926..27987,28135..28206,28322..28424,28525..28596,28703..28813,31047..31526)] [gbkey=CDS]
Sequence

ATGATGGATGTTGTCAATAACATAGCTGTTTCTGGAAACGGGTTGGGCTTTGGAAATGGA
GCTCACCAACTTCCTGAAGTTGTTGCTGGCATACCAAACGGGATGCCTCATGCAAGTTCC
AGTACTGAAGAACTAGAGAGGAGTTTCCAGAGTACTGCGGTATTGAATGATAGTGAAACA
GTTGACTCTTCTGTCCAAGAGGTCAGTCGTGAAGCTATGACAACTGCAGAAAGCAATTCT
GGTGTCAGTTCCGAGGAACATGAAGCAAAAGAATCTGATGAGGCGAAGAACAGTAAAGAG
CGAAAGGCTCCAGGAAGGGCAAGGAACACTAAGAATTCAAGCCCTAAAAATGGCGCAGCC
AAGAAAAGTAAAGATGGAAAAGATGCATCAAATGGTACCCTCGCTTCCAAATCGCGTCCG
AAACAGCCATCTTCCACTGATGCAAAGAGTAAATCATTCAGTGACAAGAAAACTACTGAG
TACTATTCAAAACCTACATTGGCTCATCTAAATGTTAATCGTGCTAAGCAACCAGGCCAT
GCTGAAGTAGCATCAGCTTCTCCAAGTGCTGCCCACTCTGAAGGCCTTAAGGAAACAACA
AAACTGAAGCCTTTGAAGAAAGTGCCCCCTAATAAAGCTGATGGAAGTGCGGAGTTATCT
TCTAGTCCTACTGGTGCATCAGATGCCAAAACTCGCAAAGTAGGTAGTCTTCCAACCTAC
GATATCAATTTCAAGTGTGATGAAAGAGCTGAGAAAAGGAAAGAGTTTTACTCCAAGCTT
GAAGAAAAAATACATGCAAAGGAAGTTGAGAAGAGTAATCTGCAAGCCAAGACTAAGGAA
ACTCAGGAAGCTGAGATCAAAATGCTAAGGAAGAGCTTAAAATTTAAAGCAACTCCTATG
CCAAGCTTTTATCAGGAACCTGCTCCTCCAAAGGTGGAGTTGAAGAAGATTCCACCAACA
AGAGCTAAATCCCCCAAACTTGGGAGGAGAAAGAGCTCTCCCACCAAAGAAGGAAACAAC
GAGAGTGTCATGCGCCCAAGTAGGTTAAGCTTGGACGAAAATGCATCTCAAAATGATCCC
GTCAAAGGGCATTCTCCTCTCAATTTTAAGAAGCCTCAAAGGAAGTCACTTCCAAAGCTG
CCATCTGAGAAAACCAACTTATCCAATGAAACAAGAAAGCCTTCTATTCGCAAATCTAGC
TTATCCAAGAAATCAACTGAAGCTAAATCTCTGCAGAATGCTTTACCCAAAGAGATGGGT
GAAGTTGCTTCTCAACCAAACAACCAACTCGAGCAAATTACTGAACGTGAAGCAGATGTT
CAAGAGTGTGAGGTTGTATCAACTGTTGAATCAAGCCAGCCAGAGACTGTAGTTGAAGCT
CAAATAGAGCCTAATCAGATGGAGGAACACGTTTCAGTCGAGCACTAA

Peptide Sequence

PEP ID

XP_016462224.1
PEP Infomation

PREDICTED: protein WVD2-like 5 isoform X2 [Nicotiana tabacum]
Sequence

MMDVVNNIAVSGNGLGFGNGAHQLPEVVAGIPNGMPHASSSTEELERSFQSTAVLNDSET
VDSSVQEVSREAMTTAESNSGVSSEEHEAKESDEAKNSKERKAPGRARNTKNSSPKNGAA
KKSKDGKDASNGTLASKSRPKQPSSTDAKSKSFSDKKTTEYYSKPTLAHLNVNRAKQPGH
AEVASASPSAAHSEGLKETTKLKPLKKVPPNKADGSAELSSSPTGASDAKTRKVGSLPTY
DINFKCDERAEKRKEFYSKLEEKIHAKEVEKSNLQAKTKETQEAEIKMLRKSLKFKATPM
PSFYQEPAPPKVELKKIPPTRAKSPKLGRRKSSPTKEGNNESVMRPSRLSLDENASQNDP
VKGHSPLNFKKPQRKSLPKLPSEKTNLSNETRKPSIRKSSLSKKSTEAKSLQNALPKEMG
EVASQPNNQLEQITEREADVQECEVVSTVESSQPETVVEAQIEPNQMEEHVSVEH

Transcript Sequence

Gene sequence data has not been registered.